Total Number of Publications : 241
Cumulative Impact Factor : 893.80
Average Impact Factor : 3.74
Cumulative Impact Factor : 893.80
Average Impact Factor : 3.74
Year 2025
- Deciphering Saquinavir-Bovine Serum Albumin Interactions: Spectroscopic and Computational Insights
- Respiratory Viruses and Systemic Lupus Erythematosus: Biomarkers and Mechanisms Leading to Autoimmunity
Year 2024
- Molecular dynamics simulations revealed structural differences among TTHA1873-DNA interaction
- MIPDS:A Comprehensive database on the Molecular Interactions in Protein Dimer Structures
- Machine learning-based Gene Expression Biomarkers to distinguish Zika and Dengue virus infections: Implications for diagnosis
- CSSP-2.0: A refined Consensus method for accurate protein secondary structure prediction
- MyxoPortal: a database of myxobacterial genomic features
DATABASE - Journal of Biological databases and curation (2024). Vol. 2024, Article ID.baae056.
doi: 10.1093/database/baae056. [ IF: 3.4 ]
- Cumulative phylogenetic,sequence and structural analysis of Insulin superfamily proteins provide unique structure-function insights
- Alternate conformations found in protein structures implies biological functions: A case study using Cyclophilin A
- Finding identical sequence repeats in multiple protein sequences: An algorithm
- Crystal Structure of 1-(E)- [(5-bromo-2-hydroxybenzylidene amino)pyrrolidin-2-one]: Design, synthesis and computational evaluation of a novel racetam congener for Epilepsy
Year 2023
- A Novel ML Approach for Computing Missing Sift, Provean, and Mutassessor Scores in Tp53 Mutation Pathogenicity Prediction
- M Protein from Dengue virus oligomerizes to pentameric channel Protein: In silico Analysis study
- A novel search engine for proteins involved in Notch crosstalk signaling pathways
- Identification of Potential Genes and Critical Pathways in Postoperative Recurrence of Crohns's Disease by Machine Learning and WGCNA Network Analysis
- Identification of potent anti-fibrinolytic compounds against plasminogen and tissue-type plasminogen activator employing in silico approaches
[ IF: 5.235 ] - Functional characterization of a hypothetical protein (TTHA1873) from Thermus thermophilus
- In Vitro and In Silico Perspectives to Explain Anticancer Activity of a Novel Syringic Acid Analog ((4-(1H-1, 3-benzodiazol-2-yl)-2, 6-dimethoxy phenol)) through Apoptosis Activation and NFkB Inhibition in K562 Leukemia Cells
Year 2022
- Computational Analysis of RNA Sequencing Dataset Reveals Novel Associations in Response to Artemisinin-Resistant Malaria: Implications in Drug Discovery and Design
- Structure of the hypothetical protein TTHA1873 from Thermus thermophilus
[ IF: 1.072 ] - Structural characterization of a putative recombinant L-amino acid oxidase from Leptospira interrogans
- Identification of the effect of missense variants associated with ribosomopathies using an ensemble approach to resolve conflicting interpretations
- K-nearest-neighbor algorithm to predict the survival time and classification of various stages of oral cancer: a machine learning approach
- Bi-Directional LSTM: A Novel RNN-Based Forward and Backward Pass Approach for Bio-NER in EMRs
- Therapeutic target identification and evaluation using machine learning
- Methods and Applications of Machine Learning Techniques in Structure Based Drug Discovery
Year 2021
- Anamoly Detection on Medical Images using Autoencoder and Convolutional Neural Network
- Mutation-dependent Refolding of Prion Protein Unveils Amyloidogenic-related Structural Ramifications: Insights from Molecular Dynamics Simulations
- Screening of FDA-approved compound library identifies potential small-molecule inhibitors of SARS-CoV-2 non-structural proteins NSP1,NSP4,NSP6 and NSP13: molecular modeling and molecular dynamics studies
- Aspects of Protein Structure, Function and Dynamics in Rational Drug Designing
- Role of advanced computing in the drug discovery process
Year 2020
- Insights of structure-based pharmacophore studies and inhibitor design against Gal3 receptor through molecular dynamics simulations
- Structural and functional characterization of oligomeric states of proteins in RecFOR pathway
- C-halogen… pi interactions in nucleic acids: a database study
- Proposing the Promiscuous Protein Structures in JNK1 and JNK3 for Virtual Screening in Pursuit of Potential Leads
- The conformational dynamics of wing gates Ile199 and Phe103 on the binding of dopamine and benzylamine substrates in human Monoamine oxidase B
- IMRPS: Inserted and Modified Residues in Protein Structures: A Database
Year 2019
- Understanding the dual mechanism of bioactive peptides targeting the enzymes involved in Renin Angiotensin System (RAS): An In-Silico Approach
- Structural determination of Enzyme-Graphene Nanocomposite Sensor Material
- MRPC: Missing Regions in Polypeptide Chains - A Knowledgebase
- Disassociation of β1-α1-β2 from the α2-α3 domain of prion protein (PrP) is a prerequisite for the conformational conversion of PrPC into PrPSc: Driven by the free energy landscape
- ACMS :A database of alternate conformations found in the atoms of main and side chains of protein structures
- Diffraction precision index of macromolecular structures: A web based database
- RepEx: A web server to extract sequence repeats from Protein and DNA sequences
- Insights into product release dynamics through structural analyses of Thymidylate kinase
- Glaucoma Pred: Glaucoma prediction based on Myocilin genotype and phenotype information
Year 2018
- PlaneFinder: A methodology to find the best plane for a set of atoms involved in the metal coordination in the protein structures
- Structural and biological evaluation of halogen derivatives of 1,9-pyrazoloanthrones towards the design of specific potent inhibitor of c-Jun-N-terminal kinase (JNK)
- Structural and functional roles of dynamically correlated residues in Thymidylate kinase
Year 2017
- Molecular Docking and Molecular Dynamics simulations of Fumarate Hydratase an its mutant H235N complex with Pyromellitic acid and Citrate
- Opioid receptor modulators with a cinnamyl group
- Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate
- Structure determination of contaminant proteins using the MarathonMR procedure
- New biochemical insight of conserved water molecules at catalytic and structural Zn2+ ions in Human Matrix Metalloproteinase-I: A Study by MD-Simulation
- Crystal structures of an archaeal Thymidylate kinase from Sulfolobus tokodaii provide insights into the role of a conserved active site Arginine residue
- PanGeT: Pan-Genomics Tool
- Melioidosis Database (MDB): A comprehensive web-based resource on Melioidosis and gene protein repository for Burkholderia pseudomallei
Year 2016
- Role of sequence evolution and conformational dynamics in the substrate specificity and oligomerization mode of thymidylate kinases
- NIMS: A database on Nucleobase compounds and their Interactions in Macromolecular Structures
- Ebolavirus Database (EDB): Gene and protein information resource for ebolaviruses
- Hydrogen Bonds Computing Server (HBCS): An online web server to compute hydrogen bond interactions and their precision
Year 2015
- 3 β-Methoxy Derivation of withaferin-a Attenuates its Anticancer Potency: Bioinformatics and Molecular Evidences
- The putative role of some conserved water molecules in the structure and function of human transthyretin
- Small Angle Neutron Scattering Studies of Glucose Oxidase Immobilized on Single Layer Graphene: Relevant to Protein Microfluidic Chip
- Using Small Angle Neutron Scattering on Glucose Oxidase immobilized on Single Layer Graphene
- Catalytic pathway, substrate binding and stability in SAICAR synthetase: A Structure and Molecular dynamics study
JOURNAL OF STRUCTURAL BIOLOGY (2015). Vol 191(1), 22-31. doi: 10.1016/j.jsb.2015.06.006.
[ IF: 3.234 ] - Online_DPI: A web server to Calculate the Diffraction Precision Index for a Protein Structure
Year 2014
- Anthrapyrazolone analogues intercept inflammatory JNK signals to moderate endotoxin induced septic shock
, Kithiganahalli Balaji and T. N. Guru Row
SCIENTIFIC REPORTS - NATURE (2014). 4, 7214. doi: 10.1038/srep07214. [ IF: 4.997 ] - A knowledgebase of macromolecular non-covalent interactions including precision
ACTA CRYST (2014). A70, C497.[ IF: 2.331 ] - Haemophilus influenzae Genome Database (HIGDB): A single point web resource for Haemophilus influenzae
COMPUTERS IN BIOLOGY AND MEDICINE (2014). Vol 55, 86-91. doi: 10.1016/j.compbiomed.2014.10.001. [ IF: 7.7 ] - Evolutionary Analysis of CRISPRs in Archaea: An Evidence for Horizontal
Gene Transfer
JOURNAL OF PROTEOMICS & BIOINFORMATICS (2014). S9-005. doi:10.4172/jpb.s9-005. - Streptococcus pneumoniae Genome Database (SPGDB): A database for strain specific comparative analysis of Streptococcus pneumoniae genes and proteins
GENOMICS (2014). Vol 104, 582-586. doi: 10.1016/j.ygeno.2014.09.012. [ IF: 4.31 ] - Alkyl chain substituted 1, 9- Pyrazoloanthrones exhibit prominent inhibitory effect on c-Jun N-terminal Kinase (JNK)
ORGANIC & BIOMOLECULAR CHEMISTRY (2014). Vol 12(26), 4656-4662. doi: 10.1039/c4ob00548a.
[ IF: 3.89 ] - PPS: A computing engine to find Palindromes in all Protein sequences
- Conserved water-mediated recognition and dynamics of NAD+ (carboxamide group) to hIMPDH enzyme: water mimic approach toward the design of isoform-selective inhibitor
J. BIOMOL. STRUCT. DYN (2014). Vol 32(8), 1248-1262. doi: 10.1080/07391102.2013.812982. [ IF: 5.235 ]
Year 2013
- Do we see what we should see? Describing the non-covalent interactions in protein structures including precision
IUCrJ (2014). Vol 1(1), 74-81. doi: 10.1107/s2052252513031485. [ IF: 5.588 ] - Molecular dynamics perspective on the protein thermal stability: A
case study using SAICAR synthetase
- RepEx: Repeat Extractor for Biological Sequences.
- Crystal structures and binding studies of atovaquone and its derivatives with cytochrome bc1: a molecular basis for drug design
CRYST ENG COMM (2013). Vol 15, 4871-4884.[ IF: 3.756 ] - A method to find palindromes in nucleic acid sequences
BIOINFORMATION (2013). Vol 9(5), 255-258. - An algorithm to find all palindromic sequences in proteins
J. BIOSCIENCES (2013). Vol 38(1), 173-177. [ IF: 2.9 ] - Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of thymidylate kinase(TTHA1607) from Thermus thermophillus HB8
ACTA CRYST (2013). Vol F69, 118-121 . [ IF: 1.072 ] - Comparative genomics reveals 'novel' Fur regulated sRNAs and coding genes in diverse proteobacteria
GENE (2013). Vol 516(2), 335-344. [ IF: 3.913 ] - Structure of SAICAR synthetase from Pyrococcus horikoshii OT3:Insights into thermal stability
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. (2013). Vol 53, 7-19.
[ IF: 8.025 ]
Year 2012
- Aromatic-Aromatic Interactions in Structures of Proteins and Protein-DNA Complexes: A study based on orientation and distance
BIOINFORMATION (2012). Vol 8(24), 1220-1224. - Biomat_dBase: A database on Biomaterials
and S. C. Kundu
THE OPEN TISSUE ENGINEERING AND REGENERATIVE MEDICINE JOURNAL (2012). Vol 5, 9-16.
- Differential Activities of the Two Closely Related Withanolides,Withaferin A and Withanone: Bioinformatics and Experimental Evidences
PLoS ONE (2012). 7(9): e44419. doi: 10. 1371/journal. pone. 0044419. [ IF: 3.7 ] - Role of invariant water molecules and water mediated ionic interactions in D-xylose isomerase from Streptomyces rubiginosus
J. BIOMOL. STRUCT. DYN. (2012). Vol 31(4), 376-384. [ IF: 5.235 ] - AS3P: A fast Algorithm to Search Structurally Similar Proteins
ICIC (3). (2012). 166-173. - Homopeptide Repeats: Implications in protein structure, function and evolution
GENOMICS, PROTEOMICS AND BIOINFORMATICS (2012). Vol 10(4), 217-225. [ IF: 6.409 ] - Fragment Finder 2.0: A computing server to identify structurally similar fragments
J. APPL. CRYST (2012). Vol 45, 332-334. [ IF: 4.868 ] - SMS-2.0: An updated database to study the structural plasticity of short peptide fragments in non-redundant proteins
GENOMICS, PROTEOMICS AND BIOINFORMATICS (2012). Vol 10(1), 44-50. [ IF: 6.409 ] - Transmembrane Domains
ENCYCLOPEDIA OF LIFE SCIENCES. D. (2012). Transmembrane Domains. eLS. - A new pentameric structure of rotavirus NSP4 revealed by molecular replacement
ACTA CRYST. (2012). Vol D68, 57-61. [ IF: 5.699 ] - Sequence-structure similarity: Do sequentially identical peptide fragments have similar three-dimensional structures?
CURR. BIOINFORMATICS .(2012). Vol 7(2), 111-115. [ IF: 4.85 ]
Year 2011
- A Novel Pentameric Structure of the Diarrhea-inducing Region of the Rotavirus Enterotoxigenic Protein NSP4
( JVI00349-11 Version 2 )
JOURNAL OF VIROLOGY (2011). Vol 85(23), 12721-12732. [ IF: 6.549 ] - Junker: An Intergenic Explorer for Bacterial genomes
GENOMICS, PROTEOMICS AND BIOINFORMATICS (2011). Vol 9(4-5), 179-182. [ IF: 6.409 ] - Structural analysis of NADPH depleted bovine liver catalase and its inhibitor complexes
INT J BIOCHEM MOL BIOL (2011). Vol 2(1), 67-77. - Water-mediated ionic interactions in protein structures
J. BIOSCIENCES (2011). Vol 36(2), 253-263. [ IF: 2.9 ] - Structural Biology of M. tuberculosis Proteins: The Indian Efforts
TUBERCULOSIS RESEARCH (2011). Vol 91(5), 456-468 - RPS: Repeats in Protein Sequences
J. APPL. CRYST. (2011). Vol 44, 647-650.[ IF: 4.868 ] - BSSB: Blast Server for Structural Biologists
J. APPL. CRYST. (2011). Vol 44, 651-654. [ IF: 4.868 ] - Crystal structures, dynamics and functional implications of molybdenum cofactor biosynthesis protein MogA from two thermophilic organisms
ACTA CRYST. (2011). Vol F67, 2-16 [ IF: 1.072 ]
Year 2010
- An Algorithm to find all identical motifs in multiple biological sequences
LECTURES NOTES IN BIOINFORMATICS (2010). Vol 6282, 137-148. - sRNAscanner: A computational tool for intergenic small RNA detection in bacterial genomes
PLoS ONE (2010). Vol 5(8), e11970. [ IF: 3.7 ] - Crystal structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8
ACTA CRYST. (2010). Vol D66, 821-833. [ IF: 5.699 ] - Evolution, homology conservation and identification of unique sequence signatures in GH19 family chitinases
J. MOL. EVOL (2010). Vol 70(5), 466-478. [ IF: 3.973 ] - An Algorithm to find distant repeats in a pair of protein sequences
PATTERN RECOGNITION LETTERS (2010). Vol 31, 2161-2169.[ IF: 4.757 ] - ProSTRIP: A method to find similar structural repeats in three-dimensional protein structures
COMPUT. BIO. CHEM. (2010). Vol 34(2), 126-130. [ IF: 3.737 ] - Recognition of active and inactive catalytic triads: A template based approach
INT. J. BIO. MACROMOLECULES (2010). Vol 46, 317-323. [ IF: 8.025 ] - PsRNA: A computing engine for comparative identification of Putative Small RNA locations within the Intergenic Regions
GENOMICS, PROTEOMICS AND BIOINFORMATICS (2010). Vol 8(2), 127-134. [ IF: 6.409 ] - Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of the putative SAICAR synthetase (PH0239) from Pyrococcus horikoshii OT3
ACTA CRYST. (2010). Vol F66, 180-183. [ IF: 1.072 ] - FAIR: A server for internal sequence repeats
BIOINFORMATION (2010). Vol 4(7), 271-275. - Free and ATP-bound structures of Ap4A hydrolase from Aquifex aeolicus V5
ACTA CRYST. (2010). Vol D66, 116-124. [ IF: 5.699 ] - SSMBS: A web server to locate Sequentially Separated Motifs in Biological Sequences
J. APPL. CRYST. (2010). Vol 43, 203-205.[ IF: 4.868 ] - MLDB: Macromolecule Ligand DataBase
J. APPL. CRYST. (2010). Vol 43, 200-202.[ IF: 4.868 ] - MIPS: Metal Interactions in Protein Structures
J. APPL. CRYST. (2010). Vol 43, 196-199.[ IF: 4.868 ]
Year 2009
- An Algorithm to find similar internal sequence repeats
CURR. SCIENCE (2009). Vol 97(9), 1345-1349. [ IF: 1.169 ] - Computer-aided drug design of pyranopyrazoles and related compounds for checkpoint kinase-1
LETTERS IN DRUG DESIGN and DISCOVERY (2009). Vol 6, 579-584. [ IF: 1.099 ] - BSDD-2.0: Biomolecules Segment Display Device - An updated web accessible computing resource
CURR. SCIENCE (2009). Vol 97(1), 28-32. [ IF: 1.169 ] - Structure, dynamics and interactions of jacalin. Insights from molecular dynamics simulations examined in conjunction with results of X-ray studies
PROTEINS: STRUCTURE, FUNCTION, BIOINFORMATICS (2009). Vol 77, 760-777. [ IF: 4.088 ] - An insight to the dynamics of conserved water molecular triad in IMPDH II (Human): Recognition of cofactor and substrate to catalytic Arg 322
J. BIO. MOL. STR. and DYNAMICS (2009). Vol 27(2), 149-158. [ IF: 5.235 ] - CsrA interacting small RNAs in Haemophilus spp genomes: A theoretical analysis
ARCH. MICROBIO. (2009). Vol 191, 451-459. [ IF: 2.8 ] - Effect of disulfide bonds in antifungal peptide from Petunia hybrida: A molecular dynamics study
THE OPEN STRUCTURAL BIOLOGY JOURNAL(2009). Vol 3, 84-93. - Influence of disulfide bonds on the conformation of the antifungal protein from Eucommia Ulmoides Oliver
THE OPEN STRUCTURAL BIOLOGY JOURNAL(2009). Vol 3, 94-103. - CSSP (Consensus Secondary Structure Prediction): A web-based server for structural biologists
J. APPL. CRYST. (2009). Vol 42, 336-338.[ IF: 4.868 ] - Conserved water-mediated H-bonding dynamics of catalytic Asn 175 in Plant thiol protease
J. BIOSCIENCES (2009). Vol 34(1), 27-34. [ IF: 2.9 ] - Large cryptic internal sequence repeats in protein structures from Homo sapiens
J. BIOSCIENCES (2009). Vol 34(1), 103-112. [ IF: 2.9 ] - Conserved water mediated H-bonding dynamics of inhibitor, cofactor, Asp 364 and Asn 303 in Human IMPDH II
J. BIO. MOL. STR. and DYNAMICS (2009). Vol 26(4), 497-507. [ IF: 5.235 ] - Structural and functional role of water molecules in bovine pancreatic phospholipase A2: A data-mining approach
ACTA CRYST. (2009). Vol D65, 74-84. [ IF: 5.699 ]
Year 2008
- Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus Horikoshii
ACTA CRYST. (2008). Vol D64, 1012-1019. [ IF: 5.699 ] - Algorithm to find distant repeats in a single protein sequence
BIOINFORMATION (2008). Vol 3(1), 28-32. - Structures and molecular-dynamics studies of three active site mutants of bovine pancreatic phospholipase A2
ACTA CRYST. (2008). Vol D64, 1003-1011. [ IF: 5.699 ] - WAP (2.0) : An updated computing and visualization server for water molecules
J. APPL. CRYST. (2008). Vol 41, 952-954.[ IF: 4.868 ] - An Algorithm to find all identical internal sequence repeats
CURR. SCIENCE (2008). Vol 95(2), 188-195.[ IF: 1.169 ] - A Method to find Sequentially Separated Motifs in Biological sequences (SSMBS)
LECTURES NOTES IN BIOINFORMATICS (2008). Vol 5265, 13-27. - Role of water molucules and ion pairs in Dps and related ferritin-like structures
INT . J . BIOL. MACROMOLECULES (2008). Vol 43(4), 333-338. [ IF: 8.025 ] - Crystallization and preliminary crystallographic studies of L30e, a ribosomal protein from Methanocaldococcus jannaschii (MJ1044)
ACTA CRYST. (2008). Vol F64, 102-104. [ IF: 1.072 ] - RPMS : Ramachandran Plot for Multiple Structures
J. APPL. CRYST. (2008). Vol 41, 219-221.[ IF: 4.868 ]
Year 2007
- Ramachandran Plot on the web 2.0
PROTEIN AND PEPTIDE LETTERS (2007). Vol 14(7), 669-671. [ IF: 1.927 ] - Structure and carbohydrate specificity of ß-prism I fold lectins
GLYCOBIOLOGY (2007). 150-159.[ IF: 5.954 ] - Evolutionary insights from suffix array based genome sequence analysis
J. BIOSCIENCES (2007). Vol 32(5), 871-881. [ IF: 2.9 ] - Conformation Angles Database (CADB-3.0)
PROTEIN AND PEPTIDE LETTERS (2007). Vol 14(7), 665-668. [ IF: 1.927 ] - Role of N and C- terminal tails in DNA binding and assembly in Dps: Structural studies of Mycobacterium smegmatis Dps deletion mutants
J. MOL. BIO. (2007). Vol 370, 752-767. [ IF: 6.151 ] - PSAP : Protein Structure Analysis Package
J. APPL. CRYST. (2007). Vol 40, 773-777.[ IF: 4.868 ] - Ion-pairs in non-redundant protein structures
J. BIOSCIENCES (2007). Vol 32(4), 693-704. [ IF: 2.9 ] - Preliminary X-ray crystallographic study of glucose dehydrogenase from Thermus thermophilus HB8
ACTA CRYST. (2007). Vol F63, 446-448. [ IF: 1.072 ] - Structural biology of recombinant bovine pancreatic phospholipase A2 and its inhibitor complexes
K. Sekar.
CURRENT TOPICS IN MEDICINAL CHEMISTRY (2007). Vol 7(8), 779-785 [ IF: 3.57 ] - Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of molybdopterin synthase from Thermus thermophilus HB8
ACTA CRYST. (2007). Vol F63, 324-326. [ IF: 1.072 ] - Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of DHNA synthetase from Geobacillus kaustophilus
ACTA CRYST. (2007). Vol F63, 103-105. [ IF: 1.072 ] - BioSuite: A comprehensive bioinformatics software package (A unique industry-academia collaboration)
CURR. SCIENCE (2007). Vol 92(1), 29-38.[ IF: 1.169 ] - Crystallization and preliminary crystallographic analysis of molybdenum cofactor biosynthesis protein C from Thermus thermophilus
ACTA CRYST. (2007). Vol F63, 27-29. [ IF: 1.072 ]
Year 2006
- SMS: Sequence, Motif and Structure - A database on the structural rigidity of peptide fragments in non-redundant proteins
IN SILICO BIOLOGY (2006). Vol 6(3), 229-235. [ IF: 0.411 ] - 3dSS: 3D Structural Superposition
NUCL. ACIDS RES. (2006). Vol 34, W128-W134. [ IF: 14.9 ] - TVSBS: A fast exact pattern matching algorithm for biological sequences
CURR. SCIENCE (2006). Vol 91(1), 47-53.[ IF: 1.169 ] - Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: Monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A2
ACTA CRYST. (2006). Vol D62, 717-724. [ IF: 5.699 ] - Artificial life and living systems: Insight into artificial Life and its implications in life science research
BIOINFORMATION (2006). Vol 1(4), 139-140. - Ab initio structure determination of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2 at atomic and high resolution using ACORN
CURR. SCIENCE (2006). Vol 90(8), 1091-1099.[ IF: 1.169 ] - Third calcium ion found in an inhibitor bound phospholipase A2
ACTA CRYST. (2006). Vol D62, 392-397. [ IF: 5.699 ] - Interaction of water molecules in non-identical protein structures
IND. J. CHEM (2006). Vol 45A, 159-162.[ IF: 0.412 ] - Atomic resolution structure of the double mutant (K53,56M) of bovine pancreatic phospholipase A2
ACTA CRYST. (2006). Vol F62, 1-5. [ IF: 1.072 ]
Year 2005
- Unusual sugar specifcity of banana lectin from Musa Paradisiaca and its probable evolutionary origin. Crystallographic and modelling studies .
GLYCOBIOLOGY (2005). Vol 15(10), 1025-1032. [ IF: 5.954 ] - PSST-2.0 : Protein data bank Sequence Search Tool
APPL. BIOINFO. (2005). Vol 4(2), 141-145. - Analysis of string-searching algorithms on biological sequence databases
CURR. SCIENCE (2005). Vol 89(2), 368-374.[ IF: 1.169 ] - Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs. Biological implications of structural plasticity and variability in quaternary association.
ACTA CRYST. (2005). Vol D61, 1140-1148. [ IF: 5.699 ] - CADB - 2.0: Conformation Angles DataBase
ACTA CRYST. (2005). Vol D61, 637-639. [ IF: 5.699 ] - SSEP - 2.0: Secondary Structural Elements of Proteins
ACTA CRYST. (2005). Vol D61, 634-636. [ IF: 5.699 ] - Structural basis for the energetics of jacalin - sugar interactions:Promiscuity versus specificity
J. MOL. BIOL. (2005). Vol 347(1), 181-188. [ IF: 6.151 ] - Fragment Finder: A web-based software to identify similar three-dimensional structural motif
NUCL. ACIDS RES. (2005). Vol 33, W85-W88. [ IF: 14.9 ] - Atomic resolution (0.97Å) structure of the triple mutant (K53, 56, 121M) of bovine pancreatic phospholipase A2
ACTA CRYST. (2005). Vol F61, 3-7. [ IF: 1.072 ]
Year 2004
- Purification, crystallization and Preliminary X-ray structure analysis of the banana lectin from Musa paradisiaca
ACTA CRYST. (2004). Vol D60, 2104-2106. [ IF: 5.699 ] - A redetermination of the structure of the triple mutant (K53,56,120M) of phospholipase A2 at 1.6 Å resolution using Sulfur-SAS at 1.54 Å wavelength
ACTA CRYST. (2004). Vol D60, 1586-1590. [ IF: 5.699 ] - X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps like molecules
J. MOL. BIOL (2004). Vol 339(5), 1103-1113. [ IF: 6.151 ] - BSDD: Biomolecules Segment Display Device - A web based interactive display tool
NUCL. ACIDS RES. (2004). Vol 32, W645-W648. [ IF: 14.9 ] - A Fast Pattern Matching Algorithm
J. CHEM. INF. and COMP. SCIENCES (2004). Vol 44(4), 1251-1256. - LySDB: Lysozyme Structural Database
- THGS: A web-based database of Transmembrane Helices in Genome Sequences
NUCL. ACIDS RES. (2004). Vol 32, D125-D128. [ IF: 14.9 ]
Year 2003
- Crystal and molecular structure of 2,6-bis(4-chlorophenyl)-3-phenylpiperidin-4-one
CRYST. RES. TECHNOL. (2003). Vol 38(10), 918-921. [ IF: 1.599 ] - Crystallization and preliminary X-ray diffraction analysis of Mycobacterium smegmatis Dps
ACTA CRYST. (2003). Vol D59, 2254-2256. [ IF: 5.699 ] - Crystal structures of the free and Anisic acid bound triple mutant of phospholipase A2
J. MOL. BIOL (2003). Vol 333(2), 367-376. [ IF: 6.151 ] - Side-chain conformation angles of aminoacids : Effect of temperature factor cut-off
J. STRUC. BIOL. (2003). Vol 143, 181-184. [ IF: 3.234 ] - The crystal structure of 1,2,3,4,6-penta-O-benzoyl-α-D-mannopyranose: Observation of C-H...Π interaction as a surrogate to O-H..O interaction of a free sugar
CARBOHYDRATE RES (2003). Vol 338, 2005-2011. [ IF: 2.975 ] - Crystal and molecular structure of 2,6-bis(4-fluorobenzylidene) cyclohexanone
CRYST. RES. TECHNOL. (2003). Vol 38(9), 822-828.[ IF: 1.599 ] - Structural basis of the carbohydrate specificities of jacalin: An X-ray and modeling study
J. MOL. BIOL (2003). Vol 332(1), 217-228. [ IF: 6.151 ] - C-halogen...Π interactions in proteins:A database Study
CRYSTAL ENGINEERING (2003). Vol 6, 69-77. - Supramolecular structures of 2-cyano-3-dimethylamino-N-(4-methylphenyl)acrylamide and 2-cyano-3-dimethylamino-N-(2-methoxyphenyl)acrylamide
ACTA CRYST. (2003). Vol C59, (0394-0396). [ IF: 1.184 ] - Structure of mycobacterium tuberculosis single-stranded DNA-binding protein. Variablility in quaternary structure and its implications
J. MOL. BIOL (2003). Vol 331, 385-393.[ IF: 6.151 ] - SEM (Symmetry Equivalent Molecules) - A web-based GUI to generate and visualize the macromolecules
NUCL. ACIDS RES. (2003). Vol 31, 3356-3358. [ IF: 14.9 ] - SSEP: Secondary Structural Elements of Proteins
NUCL. ACIDS RES. (2003). Vol 31(13), 3404-3405. [ IF: 14.9 ] - CAP: Conformation Angles Package - Displaying the conformation angles of side chains in proteins
BIOINFORMATICS (2003). Vol 19(8), 1043-1044. [ IF: 6.931 ] - 3-Acetyl-2-hydroxy-2-methylchromene
ACTA CRYST. (2003). Vol E59, 0591-0593.[ IF: 0.261 ] - 3-Benzoyl-2-hydroxy-2-methylchromene
ACTA CRYST. (2003). Vol E59, 0266-0268.[ IF: 0.261 ] - 1,2-Bis[1-phenylsulfonyl-3-(phenylthio)indol-2-yl]ethene
ACTA CRYST. (2003). Vol E59, 099-0101. [ IF: 0.261 ] - 8-Chloro-4-[1-(phenylsulfonyl)indol-3-yl]-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline
ACTA CRYST. (2003). Vol E59, 049-051.[ IF: 0.261 ] - WAP: Water Analysis Package - A web-based package to calculate geometrical parameters between water oxygen and protein atoms
J. APPL. CRYST (2003). Vol 36, 167-168.[ IF: 4.868 ] - CADB: Conformational Angles Database of proteins
NUCL. ACIDS RES. (2003). Vol 31(1), 448-451.[ IF: 14.9 ]
Year 2002
- Observation of additional calcium ion in the crystal structure of the triple mutant of bovine pancreatic phospholipase A2
J. MOL. BIOL (2002). Vol 324(4), 755-762. [ IF: 6.151 ] - Ramachandran plot on the web
BIOINFORMATICS (2002). Vol 18, 1548-1549. [ IF: 6.931 ] - The crystal structure of the single-stranded DNA-binding protein from mycobacterium tuberculosis
ACTA CRYST. (2002). Vol A58, C275.[ IF: 2.331 ] - Crystal structure of the jacalin - T-antigen complex and a comparative study of lectin - T-antigen complexes
J. MOL. BIOL (2002). Vol 321, 637-645. [ IF: 6.151 ] - Crystal and molecular structure of an Acridinedione
CRYST. RES. TECHNOL. (2002). Vol 37(9), 1029-1037.[ IF: 1.599 ] - PDB Goodies - a web-based GUI to manipulate the Protein Data Bank file
ACTA CRYST. (2002). Vol D58, 1385-1386. [ IF: 5.699 ] - Crystal structures of Artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-α-D-mannose: Implications to the generation of carbohydrate specificity
J. MOL. BIOL (2002). Vol 317, 237-247. [ IF: 6.151 ] - The Crystal Structure of 4-(2-Chlorobenzyl)-5-phenyl-1,2,4-triazole
CRYST. RES. TECHNOL. (2002). Vol 37(2-3), 301-308.[ IF: 1.599 ] - Crystal Structure Analysis of 1',2',3',4'-tetrahydro-1,3-diphenyl-4-chlorospiro[2-pyrazoline-5,2-napthalen]1'one
CRYST. RES. TECHNOL. (2002). Vol 37(1), 135-141.[ IF: 1.599 ] - Crystallization and preliminary X-ray studies of the single-stranded DNA-binding protein from Mycobacterium tuberculosis
ACTA CRYST. (2002). Vol D58, 327-329. [ IF: 5.699 ]
Year 2001
- Tricoccin R6
ACTA CRYST. (2001). Vol E57, 0116-0117.[ IF: 0.261 ] - Tricoccin R2 Erratum
ACTA CRYST. (2001). Vol C57, 499.[ IF: 1.184 ] - 4-tert-Butyl-2,6-bis(piperidinomethyl)phenol
ACTA CRYST. (2001). Vol E57, 0878-0880.[ IF: 0.261 ]
Year 2000
- Crystal and molecular structure of Desmodin
CRYST. RES. TECHNOL. (2000). Vol 35(9), 1117-1123.[ IF: 1.599 ] - Structural Basis of the Anionic Interface Preference and Kcat Activation of pancreatic phospholipase A2
BIOCHEMISTRY (2000). Vol 39(40), 12312-12323. [ IF: 3.321 ] - Protein sequence search tool(PSST): A web-based interactive search engine
CURR. SCIENCE (2000). Vol 78(5), 550-552.[ IF: 1.169 ]
Year 1999
- Crystal Structure at 1.8 Å resolution and proposed amino acid sequence of a thermostable xylanase from Thermoascus aurantiacus
J. MOL. BIOL (1999). Vol 288, 999-1012. [ IF: 6.151 ] - Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2
ACTA CRYST. (1999). Vol D55, 443-447. [ IF:5.699 ] - High-resolution refinement of the orthorhombic bovine pancreatic phospholipase A2
ACTA CRYST. (1999). Vol D55, 46-50. [ IF: 5.699 ]
Year 1998
- A novel end-to-end binding of two netropsins to the DNA decamers d(CCCCCIIIII)2 , d(CCCBr5CCIIIII)2 and d(CBr5CCCCIIIII)2
NUCL. ACIDS RES. (1998). Vol 26(23), 5464-5471. [ IF: 14.9 ] - 1.72Å Resolution Refinement of the Trigonal form of bovine pancreatic phospholipase A2
ACTA CRYST. (1998). Vol D54, 342-346. [ IF: 5.699 ] - Structure of the complex of bovine pancreatic PLA2 with a Transition-State Analogue
ACTA CRYST. (1998). Vol D54, 334-341. [ IF: 5.699 ]
Year 1997
- Crystal structure of the complex of bovine pancreatic Phospholipase A2 with the inhibitor 1-hexadecyl-3(trifluoroethyl)sn-glycero-2-phosphomethanol
BIOCHEMISTRY (1997). Vol 36, 14186-14191. [ IF: 3.321 ] - Phospholipase A2 Engineering. Structural and functional roles of the highly conserved active site residue Aspartate-99
BIOCHEMISTRY (1997). Vol 36, 3104-3114. [ IF: 3.321 ]
Year 1996
- Phospholipase A2 Engineering. Deletion of the C-terminus segment changes substrate specificity and uncouples calcium and substrate binding at the zwitterionic interface
BIOCHEMISTRY (1996). Vol 35, 12164-12174. [ IF: 3.321 ] - A three fold symmetric β-prism fold without internal sequence homology in the two-chain Jacalin
ACTA CRYST. (1996). Vol A52, C-174.[ IF: 1.184 ] - A novel mode of carbohydrate recognition in Jacalin, a Moraceae plant lectin with a β-prism fold
NATURE STRUC. BIOL. (1996). Vol 3(7), 596-603. - Tricoccin R2
ACTA CRYST. (1996). Vol C52, 92-94.[ IF: 1.184 ] - Tricoccin S43
ACTA CRYST. (1996). Vol C52, 110-112.[ IF: 1.184 ]
Year 1994
- Structure of Trijugin A
ACTA CRYST. (1994). Vol C50, 460-462.[ IF: 1.184 ] - STATCW and STATCN: FORTRAN programs for conducting statistical tests for centrosymmetry
J. APPL. CRYST (1994). Vol 27, 653-659. [ IF: 4.868 ]
Year 1993
- Structure of Zizyberannalic Acid
ACTA CRYST. (1993). Vol C49, 616-618.[ IF: 1.184 ] - Crystal and Molecular Structure of 1-Methyl-3-ethyl-2,6-diphenyl-4- piperidone and a study of the geometry of the 4-piperidone ring
J. CRYST and SPEC. RES. (1993). Vol 23(2), 101-105. - Structure of 1,8-Dimethyl-4-oxo-1,2,2a,3,4,5-hexahydrocyclopenta[de]quinoline
ACTA CRYST. (1993). Vol C49, 97-99.[ IF: 1.184 ] - Structure of 4-piperidone derivatives III. 1,3,3-Trimethyl-2, 6-diphenyl-4-piperidone and 2,6-Bis(p- chlorophenyl)-1,3,5-Trimethyl-4-piperidone
ACTA CRYST. (1993). Vol C49, 93-95.[ IF: 1.184 ] - New techniques for the determination of the Scale and Overall isotropic temperature factors
ACTA CRYST. (1993). Vol A49, 389-398.[ IF: 2.331 ] - Statistical Characteristics of the Truncated Wilson Distributions
ACTA CRYST. (1993). Vol A49, 162-170.[ IF: 2.331 ]
Year 1992
- Structure of Dimethyl Ceanothate
ACTA CRYST. (1992). Vol C48, 2251-2253.[ IF: 1.184 ] - An algorithm for conducting hypotheses testing based on Neymann-Pearson Lemma. I. The case of continuous univariates
CURR. SCIENCE (1992). Vol 63(11), 677-681.[ IF: 1.169 ]
Year 1991
- Theoretical Evaluation of the overall values of Booth type R-indices based on intensity variables
PRAMANA-J.PHYSICS (1991). Vol 36(6), 581-588.[ IF: 2.669 ]
Year 1990
- STATC. A FORTRAN program for conducting statistical tests for centrosymmetry
ACTA CRYST. (1990). Vol A46, C-37.[ IF: 2.331 ] - Some aspects regarding the measurability of Bijvoet differences in the heavy atom derivatives of proteins
IND. J. PURE AND APPL. PHYSICS (1990). Vol 28, 272-275.[ IF: 0.7 ] - Structure of 4-piperidone derivatives. II. 2,6-Bis(p-methoxy phenyl)-3,5- dimethyl- 4-piperidone
ACTA CRYST. (1990). Vol C46, 1338-1340.[ IF: 1.184 ] - Structure of 4-piperidone derivatives.I. 3-Methyl-2,6-diphenyl-4-piperidone
ACTA CRYST. (1990). Vol C46, 1153-1155.[ IF: 1.184 ]
Year 1987
- Measurability of Bijvoet differences in triclinic, monoclinic and orthorhombic crystals. II
ACTA CRYST. (1987). Vol A43, 653-655.[ IF: 2.331 ]
- Miscellaneous
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